YRC Public Data Repository - Protein Structure Prediction

Protein:	KPTA_FUSNN
Organism:	Fusobacterium nucleatum subsp. nucleatum
Length:	179 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KPTA_FUSNN.

Description	E-value	Query Range	Subject Range
gi\|34763031, gi\|... - gi\|34763031\|ref\|ZP_00144006.1\| tRNA 2'phosphotransferase [Fusobacterium nucleatum subsp. vincentii A...	261.0	[0..1]	[179..1]
gi\|34103736, gi\|... - gi\|34497880\|ref\|NP_902095.1\| hypothetical protein CV_2425 [Chromobacterium violaceum ATCC 12472], gi...	257.0	[0..8]	[178..35]
gi\|163849264, gi... - gi\|76258043\|ref\|ZP_00765700.1\| Phosphotransferase KptA/Tpt1 [Chloroflexus aurantiacus J-10-fl], gi\|7...	256.0	[0..5]	[179..31]
KPTA_NOSP7 - Probable RNA 2'-phosphotransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=kptA PE=...	256.0	[0..3]	[178..5]
KPTA_CHRVO - Probable RNA 2'-phosphotransferase OS=Chromobacterium violaceum GN=kptA PE=3 SV=2 KPTA_CHRVO - Probable RNA 2'-phosphotransferase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM...	255.0	[0..8]	[178..21]
gi\|25520148, gi\|... - gi\|25524258\|pir\|\|AE2997 conserved hypothetical protein Atu3583 [imported] - Agrobacterium tumefacien... KPTA_AGRFC - Probable RNA 2'-phosphotransferase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=kptA PE=3 SV...	254.0	[0..5]	[177..3]
gi\|148568051, gi... - gi\|148655941\|ref\|YP_001276146.1\| phosphate acetyltransferase [Roseiflexus sp. RS-1], gi\|148568051\|gb...	252.0	[0..1]	[179..1]
KPTA_BURS3 - Probable RNA 2'-phosphotransferase OS=Burkholderia sp. (strain 383) GN=kptA PE=3 SV=1 KPTA_BURL3 - Probable RNA 2'-phosphotransferase OS=Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 ...	250.0	[0..5]	[178..14]
KPTA_FLAJ1 - Probable RNA 2'-phosphotransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW10...	250.0	[0..7]	[179..9]
gi\|149904695, gi... - gi\|82747814\|ref\|ZP_00910307.1\| probable RNA 2'-phosphotransferase [Clostridium beijerincki NCIMB 805...	247.0	[0..2]	[178..4]

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Predicted Domain #1

Region A:
Residues: [1-179]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNDVKLGRF ISLILRHKPE TINLKLDKNG WANTKELIEK ISKSGREIDF EILERIVNEN  60
   61 NKKRYSFNED KTKIRAVQGH SIEVNLELKE VVPPAILYHG TAFKTLESIK KEGIKKMSRQ 120
  121 HVHLSADIET AKNVATRHSG KYIILEIDTE AMLKENYKFY LSENKVWLTD FVPSKFIKF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	53.522879
Match:	1wfxA
Description:	Crystal Structure of APE0204 from Aeropyrum pernix
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
transferase activity	1.7229093219327	bayes_pls_golite062009
NAD+ ADP-ribosyltransferase activity	1.61571758931023	bayes_pls_golite062009
catalytic activity	1.25705748974699	bayes_pls_golite062009
transferase activity, transferring pentosyl groups	0.789416780073681	bayes_pls_golite062009
transferase activity, transferring glycosyl groups	0.355594977942641	bayes_pls_golite062009
binding	0.212977268771834	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: