| Protein: | EX9_ECOLI |
| Organism: | Escherichia coli |
| Length: | 281 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EX9_ECOLI.
| Description | E-value | Query Range |
Subject Range |
|
|
298.0 | [0..30] | [279..1] |
|
|
298.0 | [0..15] | [281..46] |
|
|
295.0 | [0..32] | [278..5] |
|
|
293.0 | [0..30] | [278..9] |
|
|
292.0 | [0..32] | [278..5] |
|
|
290.0 | [0..31] | [277..1] |
|
|
290.0 | [0..31] | [277..1] |
|
|
289.0 | [0..31] | [277..1] |
|
|
289.0 | [0..31] | [280..1] |
|
|
289.0 | [0..32] | [270..4] |
|
Region A: Residues: [1-281] |
1 11 21 31 41 51
| | | | | |
1 MRGLFPISHP AVACSGIECY PYRLIFKGVI VAVHLLIVDA LNLIRRIHAV QGSPCVETCQ 60
61 HALDQLIMHS QPTHAVAVFD DENRSSGWRH QRLPDYKAGR PPMPEELHDE MPALRAAFEQ 120
121 RGVPCWSTSG NEADDLAATL AVKVTQAGHQ ATIVSTDKGY CQLLSPTLRI RDYFQKRWLD 180
181 APFIDKEFGV QPQQLPDYWG LAGISSSKVP GVAGIGPKSA TQLLVEFQSL EGIYENLDAV 240
241 AEKWRKKLET HKEMAFLCRD IARLQTDLHI DGNLQQLRLV R
|
| Detection Method: |  |
| Confidence: | 66.69897 |
| Match: | 1bgxT |
| Description: | 5' to 3' exonuclease domain of DNA polymerase Taq; Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| deoxyribonuclease activity | 2.76214864778674 | bayes_pls_golite062009 |
| endonuclease activity | 2.56010795198277 | bayes_pls_golite062009 |
| flap endonuclease activity | 2.53758571886688 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 2.52591027275626 | bayes_pls_golite062009 |
| exonuclease activity | 2.5100646091515 | bayes_pls_golite062009 |
| hydrolase activity | 2.33175366185717 | bayes_pls_golite062009 |
| 5'-3' exonuclease activity | 2.29772244408635 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 2.13887861178898 | bayes_pls_golite062009 |
| catalytic activity | 1.74578892363435 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 1.70427268530827 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 1.70203514795969 | bayes_pls_golite062009 |
| nuclease activity | 1.66579180796794 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.34815460610781 | bayes_pls_golite062009 |
| 5'-3' exodeoxyribonuclease activity | 0.99824405209499 | bayes_pls_golite062009 |
| single-stranded DNA specific exodeoxyribonuclease activity | 0.93326471256937 | bayes_pls_golite062009 |
| double-stranded DNA specific exodeoxyribonuclease activity | 0.75324098318674 | bayes_pls_golite062009 |
| 5'-flap endonuclease activity | 0.59155477779901 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.44366322002827 | bayes_pls_golite062009 |
| binding | 0.135870115528543 | bayes_pls_golite062009 |
| single-stranded DNA specific 5'-3' exodeoxyribonuclease activity | 0.0390389256036001 | bayes_pls_golite062009 |
| DNA binding | 0.0110216579283602 | bayes_pls_golite062009 |
