YRC Public Data Repository - Protein Structure Prediction

Protein:	EUTQ_ECOLI
Organism:	Escherichia coli
Length:	233 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EUTQ_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|192958340, gi... - gi\|75237797\|ref\|ZP_00721813.1\| COG4766: Ethanolamine utilization protein [Escherichia coli E110019],...	199.0	[0..1]	[233..1]
gi\|157159208, gi... - gi\|75187204\|ref\|ZP_00700471.1\| COG4766: Ethanolamine utilization protein [Escherichia coli E24377A],...	199.0	[0..1]	[233..1]
gi\|192927591, gi... - gi\|75257263\|ref\|ZP_00728787.1\| COG4766: Ethanolamine utilization protein [Escherichia coli E22], gi\|... gi\|75211421, gi\|... - gi\|75211421\|ref\|ZP_00711511.1\| COG4766: Ethanolamine utilization protein [Escherichia coli B171], gi... gi\|218352818, gi... - gi\|218696086\|ref\|YP_002403753.1\| conserved hypothetical protein involved in degradation of ethanolam... gi\|194432055, gi... - gi\|83570674\|ref\|ZP_00922117.1\| COG4766: Ethanolamine utilization protein [Shigella dysenteriae 1012]... gi\|218361751, gi... - gi\|218554983\|ref\|YP_002387896.1\| conserved hypothetical protein involved in degradation of ethanolam...	199.0	[0..1]	[233..1]
gi\|75196465, gi\|... - gi\|75196465\|ref\|ZP_00706535.1\| COG4766: Ethanolamine utilization protein [Escherichia coli HS], gi\|1...	199.0	[0..1]	[233..1]
gi\|74312985, gi\|... - gi\|74312985\|ref\|YP_311404.1\| hypothetical protein SSON_2540 [Shigella sonnei Ss046], gi\|73856462\|gb\|...	197.0	[0..1]	[233..1]
gi\|189378590, gi... - gi\|189378590\|gb\|EDU97006.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str. EC5... gi\|189372311, gi... - gi\|189372311\|gb\|EDU90727.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str. EC8... gi\|208726187, gi... - gi\|208806386\|ref\|ZP_03248723.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str.... gi\|254593804, gi... - gi\|254794404\|ref\|YP_003079241.1\| hypothetical protein ECSP_3398 [Escherichia coli O157:H7 str. TW143... gi\|195936601 - gi\|195936601\|ref\|ZP_03081983.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str.... gi\|13362792, gi\|... - gi\|15832576\|ref\|NP_311349.1\| hypothetical protein ECs3322 [Escherichia coli O157:H7], gi\|13362792\|db... gi\|189362224, gi... - gi\|189362224\|gb\|EDU80643.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str. EC4... gi\|25341000, gi\|... - pir\|\|E85888 hypothetical protein Z3716 [imported] - Escherichia coli (strain O157:H7, substrain EDL... gi\|168761059, gi... - gi\|189368467\|gb\|EDU86883.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str. EC4... gi\|168778416, gi... - gi\|189003220\|gb\|EDU72206.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str. EC4... gi\|12516835, gi\|... - gi\|15802982\|ref\|NP_289012.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 EDL933]... gi\|168773637, gi... - gi\|187770684\|gb\|EDU34528.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str. EC4... gi\|189356586, gi... - gi\|189356586\|gb\|EDU75005.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str. EC4... gi\|188017095, gi... - gi\|188017095\|gb\|EDU55217.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str. EC4... gi\|13362792, gi\|... - gi\|15832576\|ref\|NP_311349.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str. Sa... gi\|208740481, gi... - gi\|208820358\|ref\|ZP_03260678.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str.... gi\|208733234, gi... - gi\|208811957\|ref\|ZP_03253286.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str.... gi\|217327830, gi... - gi\|217327830\|ref\|ZP_03443913.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str.... gi\|209396897, gi... - gi\|209396897\|ref\|YP_002271928.1\| ethanolamine utilization protein EutQ [Escherichia coli O157:H7 str...	197.0	[0..1]	[233..1]
gi\|81246320, gi\|... - gi\|82544909\|ref\|YP_408856.1\| hypothetical protein SBO_2475 [Shigella boydii Sb227], gi\|81246320\|gb\|A...	196.0	[0..1]	[233..1]
gi\|115513780, gi... - gi\|117624656\|ref\|YP_853569.1\| ethanolamine utilization protein EutQ [Escherichia coli APEC O1], gi\|1... gi\|91211789, gi\|... - gi\|91211789\|ref\|YP_541775.1\| ethanolamine utilization protein EutQ [Escherichia coli UTI89], gi\|9107... gi\|226901340, gi... - gi\|237704974\|ref\|ZP_04535455.1\| ethanolamine utilization protein EutQ [Escherichia sp. 3_2_53FAA], g... gi\|218559395, gi... - gi\|218559395\|ref\|YP_002392308.1\| conserved hypothetical protein involved in degradation of ethanolam...	196.0	[0..1]	[233..1]
gi\|26109233, gi\|... - gi\|26248827\|ref\|NP_754867.1\| ethanolamine utilization protein EutQ [Escherichia coli CFT073], gi\|261... gi\|227887496, gi... - gi\|227887496\|ref\|ZP_04005301.1\| Eut family ethanol utilization/transport protein [Escherichia coli 8...	196.0	[0..1]	[233..1]
gi\|194437660, gi... - gi\|83586892\|ref\|ZP_00925523.1\| COG4766: Ethanolamine utilization protein [Escherichia coli 101-1], g... gi\|253323693, gi... - gi\|254289195\|ref\|YP_003054943.1\| hypothetical protein ECD_02351 [Escherichia coli BL21(DE3)], gi\|253... gi\|242378059, gi... - gi\|251785786\|ref\|YP_003000090.1\| hypothetical protein B21_02313 [Escherichia coli BL21], gi\|24237805... gi\|253974335, gi... - gi\|254162434\|ref\|YP_003045542.1\| hypothetical protein ECB_02351 [Escherichia coli B str. REL606], gi...	196.0	[0..1]	[233..1]

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Predicted Domain #1

Region A:
Residues: [1-106]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLITANDI REAHARGEQA MSVVLRASII TPEAREVADL LGFTITECDE SIPVTASVPA  60
   61 SVPADKTESQ RIRETIIAQL PEGQFTESLV AQLMEKVMKE KQSLEQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	5.69897
Match:	2b5aA
Description:	C.BclI, Control Element of the BclI Restriction-Modification System
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	1.38515079082433	bayes_pls_golite062009
nucleic acid binding	1.10563582066775	bayes_pls_golite062009
DNA binding	1.05769861987155	bayes_pls_golite062009
transcription regulator activity	0.166606297907843	bayes_pls_golite062009

Predicted Domain #2

Region A:
Residues: [107-233]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAMQPSFKSV TGKGGIKVID GSSVKFGRFD GAEPHCVGLT DLVTGDDGSS MAAGFMQWEN  60
   61 AFFPWTLNYD EIDMVLEGEL HVRHEGQTMI AKAGDVMFIP KGSSIEFGTT SSVKFLYVAW 120
  121 PANWQSL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.0
Match:	2pytA
Description:	No description for 2pytA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: