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View Structure Prediction Details

Protein: Ets98B-PA
Organism: Drosophila melanogaster
Length: 518 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ets98B-PA.

Description E-value Query
Range
Subject
Range
gi|85857604 - gi|85857604|gb|ABC86337.1| IP14646p [Drosophila melanogaster]
264.0 [0..1] [518..1]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYEKMLYMP AASEMPHSPQ LKPHQFQAHT PTDQYSSYAD NFDLSLLPQE SASIPTTVFQ  60
   61 YNAPQIKVEC AWDSQPIQQQ QQPTAPYTNP SSHQLIPPPA YPHSAYPSPQ SSPLQSEFAA 120
  121 YGLGRFGGSY DSLNSPSPSL EAVSIKQELH ILPPSPPESN CETPSPRSSC GESIKAEPLD 180
  181 ADIESLIDLN SLLQQQSLQS PQNL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [205-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QDTKPDHQLL RECLEDTSFQ KRHNLKPLAL ESFIGGLAEV RGDFEPVISL ALEHAKREAD  60
   61 AICAELQISQ DPNGWSPAQV HAWLRSTLAQ FRLPPVADLE LHFCENGAAL ALLSEEEFVR 120
  121 RLPESGSTLH AQLEIWK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 2jv3A
Description: No description for 2jv3A was found.

Predicted Domain #3
Region A:
Residues: [342-426]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYADQPAHQ QHSQQSASTD HWPASYAMPH LDLDYNEDSE DDDDMEADAQ VAPLNGSTTS  60
   61 PPATNASNGG TATVKRPNGG RTGGG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [427-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSHIHLWQFL KELLASPQVN GTAIRWIDRS KGIFKIEDSV RVAKLWGRRK NRPAMNYDKL  60
   61 SRSIRQYYKK GIMKKTERSQ RLVYQFCHPY SQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.69897
Match: 1yo5C
Description: Analysis of the 2.0A crystal structure of the protein-DNA complex of human PDEF Ets domain bound to the prostate specific antigen regulatory site
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle