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View Structure Prediction Details

Protein: Ets98B-PA
Organism: Drosophila melanogaster
Length: 518 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ets98B-PA.

Description E-value Query
Range
Subject
Range
gi|85857604 - gi|85857604|gb|ABC86337.1| IP14646p [Drosophila melanogaster]
264.0 [0..1] [518..1]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYEKMLYMP AASEMPHSPQ LKPHQFQAHT PTDQYSSYAD NFDLSLLPQE SASIPTTVFQ  60
   61 YNAPQIKVEC AWDSQPIQQQ QQPTAPYTNP SSHQLIPPPA YPHSAYPSPQ SSPLQSEFAA 120
  121 YGLGRFGGSY DSLNSPSPSL EAVSIKQELH ILPPSPPESN CETPSPRSSC GESIKAEPLD 180
  181 ADIESLIDLN SLLQQQSLQS PQNL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [205-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QDTKPDHQLL RECLEDTSFQ KRHNLKPLAL ESFIGGLAEV RGDFEPVISL ALEHAKREAD  60
   61 AICAELQISQ DPNGWSPAQV HAWLRSTLAQ FRLPPVADLE LHFCENGAAL ALLSEEEFVR 120
  121 RLPESGSTLH AQLEIWK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 2jv3A
Description: No description for 2jv3A was found.

Predicted Domain #3
Region A:
Residues: [342-426]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYADQPAHQ QHSQQSASTD HWPASYAMPH LDLDYNEDSE DDDDMEADAQ VAPLNGSTTS  60
   61 PPATNASNGG TATVKRPNGG RTGGG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [427-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSHIHLWQFL KELLASPQVN GTAIRWIDRS KGIFKIEDSV RVAKLWGRRK NRPAMNYDKL  60
   61 SRSIRQYYKK GIMKKTERSQ RLVYQFCHPY SQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.69897
Match: 1yo5C
Description: Analysis of the 2.0A crystal structure of the protein-DNA complex of human PDEF Ets domain bound to the prostate specific antigen regulatory site
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle