| Protein: | DCEB_ECOLI |
| Organism: | Escherichia coli |
| Length: | 466 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DCEB_ECOLI.
| Description | E-value | Query Range |
Subject Range |
|
|
333.0 | [0..1] | [453..1] |
|
|
333.0 | [0..1] | [462..1] |
|
|
332.0 | [0..1] | [457..1] |
|
|
332.0 | [0..1] | [452..1] |
|
|
332.0 | [0..1] | [452..1] |
|
|
331.0 | [0..1] | [452..1] |
|
|
329.0 | [0..1] | [452..1] |
|
Region A: Residues: [1-466] |
1 11 21 31 41 51
| | | | | |
1 MDKKQVTDLR SELLDSRFGA KSISTIAESK RFPLHEMRDD VAFQIINDEL YLDGNARQNL 60
61 ATFCQTWDDE NVHKLMDLSI NKNWIDKEEY PQSAAIDLRC VNMVADLWHA PAPKNGQAVG 120
121 TNTIGSSEAC MLGGMAMKWR WRKRMEAAGK PTDKPNLVCG PVQICWHKFA RYWDVELREI 180
181 PMRPGQLFMD PKRMIEACDE NTIGVVPTFG VTYTGNYEFP QPLHDALDKF QADTGIDIDM 240
241 HIDAASGGFL APFVAPDIVW DFRLPRVKSI SASGHKFGLA PLGCGWVIWR DEEALPQELV 300
301 FNVDYLGGQI GTFAINFSRP AGQVIAQYYE FLRLGREGYT KVQNASYQVA AYLADEIAKL 360
361 GPYEFICTGR PDEGIPAVCF KLKDGEDPGY TLYDLSERLR LRGWQVPAFT LGGEATDIVV 420
421 MRIMCRRGFE MDFAELLLED YKASLKYLSD HPKLQGIAQQ NSFKHT
|
| Detection Method: |  |
| Confidence: | 88.0 |
| Match: | 1pmmA |
| Description: | Crystal structure of Escherichia coli GadB (low pH) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 2.29878871754893 | bayes_pls_golite062009 |
| transferase activity | 1.44093490824786 | bayes_pls_golite062009 |
| glutamate decarboxylase activity | 1.34215658716536 | bayes_pls_golite062009 |
| transferase activity, transferring nitrogenous groups | 1.28316822767388 | bayes_pls_golite062009 |
| transaminase activity | 1.24990480711889 | bayes_pls_golite062009 |
| glycine dehydrogenase (decarboxylating) activity | 1.05524734914785 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | 1.05524734914785 | bayes_pls_golite062009 |
| binding | 0.252160165096264 | bayes_pls_golite062009 |
| N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity | 0.223759435414525 | bayes_pls_golite062009 |
| pyridoxal phosphate binding | 0.16957228630576 | bayes_pls_golite062009 |
| vitamin B6 binding | 0.16957228630576 | bayes_pls_golite062009 |
| L-aspartate:2-oxoglutarate aminotransferase activity | 0.13686553668007 | bayes_pls_golite062009 |
