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View Structure Prediction Details

Protein: CBP3_ORYSA
Organism: Oryza sativa
Length: 500 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CBP3_ORYSA.

Description E-value Query
Range
Subject
Range
gi|1877219 - gi|1877219|emb|CAA70817.1| serine carboxypeptidase III, CP-MIII [Hordeum vulgare subsp. vulgare]
CBP3_HORVU - Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CBP3 PE=1 SV=2
484.0 [0..27] [500..27]

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Predicted Domain #1
Region A:
Residues: [1-500]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATARVSLIL LVVVLAASAC AEGLRLPRDA KFPAAQAERL IRSLNLLPKE AGPTGAGDVP  60
   61 SVAPGELLER RVTLPGLPQG VGDLGHHAGY YRLPNTHDAR MFYFLFESRG KKEDPVVIWL 120
  121 TGGPGCSSEL AVFYENGPFT ISNNMSLAWN KFGWDTISNI IFVDQPTGTG FSYSSDDRDT 180
  181 RHDETGVSND LYSFLQVFFK KHPEFAKNDF FITGESYAGH YIPAFASRVH QGNKANEGIH 240
  241 INLKGFAIGN GLTDPAIQYK AYTDYALDMN LIKKSDYDRI NKFIPPCEFA IKLCGTNGKA 300
  301 SCMAAYMVCN SIFSSIMKLV GTKNYYDVRK ECEGKLCYDF SNLEKFFGDK AVKEAIGVGD 360
  361 LEFVSCSTTV YQAMLTDWMR NLEVGIPALL EDGINVLIYA GEYDLICNWL GNSRWVHSME 420
  421 WSGQKDFVSS HESPFVVDGA EAGVLKSHGP LSFLKVHNAG HMVPMDQPKA SLEMLRRFTQ 480
  481 GKLKEEWLAE LPEQPMYAAM 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 106.0
Match: 1wpxA
Description: Crystal structure of carboxypeptidase Y inhibitor complexed with the cognate proteinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.3250951453762 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.815337671271829 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
endopeptidase activity 0.43631945855397 bayes_pls_golite062009
binding 0.351031277062254 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle