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View Structure Prediction Details

Protein: CE37296
Organism: Caenorhabditis elegans
Length: 578 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37296.

Description E-value Query
Range
Subject
Range
gi|124000565, gi... - gi|124000565|gb|ABM87791.1| phosphofructokinase, liver [synthetic construct], gi|123993519|gb|ABM843...
gi|50346005, gi|... - gi|50346005|ref|NP_001002021.1| liver phosphofructokinase isoform a [Homo sapiens], gi|13623609|gb|A...
651.0 [0..1] [577..221]

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Predicted Domain #1
Region A:
Residues: [1-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIGTDSALQ RIISSIDAVV ATAQSHQRAF VIEVMGRHCG YLALVAALAS EADFCFIPEW  60
   61 PAPENWRDVL CDKLSQMRSE GQRLNIIIVA EGAIDRDGKA ITAEDVKTAV KEKLKYDTRV 120
  121 TILGHVQRGG APSAFDRLLG CRMGAEAVFA LMEMTEESEP CVISIDGNVM VRVPLLKCVE 180
  181 RTQMVQKAMA DKDWTTAVML RGRSFQRNLE TYKLLTKMRT VEKDNLSEG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.37
Match: 1zxxA
Description: The crystal structure of phosphofructokinase from Lactobacillus delbrueckii
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [230-578]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HKFNVAVINV GAPAGGMNAA VRSYVRMALY HQCTVYGIED SFEGLANGSF KQFKWSDVTN  60
   61 WAMNGGSFLG TQKSLPTEKT MPQLAAQLKK HNIQALLLVG GFEAYHSTII LAENREKYPE 120
  121 FCIPMCVIPC TISNNVPGTM VSLGSDTAIN EICQMIDKIK QSATGTKRRV FIVETMGGYC 180
  181 GYLATLSALS SGADNAYIFE EPFTVQDLSD DVDVILSKME VGAKRYLVVR NEWADKNLTT 240
  241 DFVQNLFDSE GKKNFTTRVN VLGHVQQGGS PTPFDRNMGT KLAARALEFL LIQLKENLTA 300
  301 DNKVIAKSAH TATLLGLKGR KVVFTPVQDL KKETDFEHRL PSEQWLVDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.0
Match: 6pfkA
Description: ATP-dependent phosphofructokinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
6-phosphofructokinase activity 12.7403693686468 bayes_pls_golite062009
phosphofructokinase activity 11.7059647240147 bayes_pls_golite062009
carbohydrate kinase activity 9.54757838113048 bayes_pls_golite062009
fructose-6-phosphate binding 7.12870468168491 bayes_pls_golite062009
fructose binding 7.0070117394116 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 2.40595318732289 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.20407391743017 bayes_pls_golite062009
kinase activity 2.09076306615481 bayes_pls_golite062009
transferase activity 1.97789134877808 bayes_pls_golite062009
catalytic activity 1.89212073381079 bayes_pls_golite062009
monosaccharide binding 0.93954836516667 bayes_pls_golite062009
binding 0.692710585652872 bayes_pls_golite062009
hydrolase activity 0.276140444059183 bayes_pls_golite062009
fructose-2,6-bisphosphate 2-phosphatase activity 0.13423626204854 bayes_pls_golite062009
sugar binding 0.0026978348896064 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle