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View Structure Prediction Details

Protein: CE36691
Organism: Caenorhabditis elegans
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36691.

Description E-value Query
Range
Subject
Range
gi|148228313, gi... - gi|86577798|gb|AAI12956.1| LOC446949 protein [Xenopus laevis], gi|148228313|ref|NP_001087085.1| hypo...
195.0 [0..2] [334..56]

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Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPKIAIIGE GVIGCSTALQ VAQAVPDARV TVLSDRPFEQ TCSFGPAGLF RIDDIANREF  60
   61 GKSTFDWFAH LHRTEKGDKT GVKLLSGHIQ SDSKERLEQQ QKAYGDIVYN FRFLEKREIL 120
  121 DLFPNPSEHC IHYTAFASEG NKYVPYLKFQ CQARGVEFLH RKVRDLEELA NEGYDVIVNC 180
  181 AGLSGGTLAG DDDSVYPIRG VVLDVEAHWH KHFNYKDFIT FTIPKENSVV IGSVKQENRW 240
  241 DLEITDVDRK DILERYVALH PAMREPKILG EWSGLRPARK TIRIEKVEKK SEKSGKKYTV 300
  301 VHHYGHGGNG FTLGWGTAVE ATKLVKSALN SSKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.39794
Match: 1an9A
Description: D-aminoacid oxidase, N-terminal domain; D-aminoacid oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.08897727611544 bayes_pls_golite062009
catalytic activity 1.03127962968326 bayes_pls_golite062009
oxidoreductase activity 0.943208146517927 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors 0.397770205910041 bayes_pls_golite062009
protein binding 0.247306689726508 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle