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View Structure Prediction Details

Protein: YJL160C
Organism: Saccharomyces cerevisiae
Length: 287 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJL160C.

Description E-value Query
Range
Subject
Range
PIR1_YEAST - Cell wall mannoprotein PIR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PIR1 PE=1 SV...
PIR1 - O-glycosylated protein required for cell wall stability; attached to the cell wall via beta-1,3-gluc...
329.0 [0..1] [287..1]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHYKKAFLAS LLSSIALTAY APPEPWATLT PSSKMDGGTT EYRTSFGLAV IPFTVTESKV  60
   61 KRNVISQIND GQVQVTTQKL PHPVSQIGDG QIQVTTQKVP PVVSHIVSQI GDGQLQITTA 120
  121 K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [122-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVVTKSTIAV PSKTVTATAT STATAVSQIH DGQVQVTISS ASSSSVLSKS KLEPTKKPNN  60
   61 EKVIKVQACK SSGTLAITLQ GGVLIDSSGR IGSIVANRQF QFDGPPPQAG AIYAGGWSIT 120
  121 KHGTLAIGDN DVFYQCLSGT FYNLYDQSIG GQCNPVHLQT VGLVDC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle