| Protein: | YBL104C |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1038 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBL104C.
| Description | E-value | Query Range |
Subject Range |
|
|
867.0 | [0..84] | [1037..34] |
|
Region A: Residues: [1-477] |
1 11 21 31 41 51
| | | | | |
1 MGLIKKVTHW SYDNLIDYLS VNPTRDEVTH YKVDPENESD ESIIKLHTVK DFGSITCLDY 60
61 SESEIGMIGV GEKNGYLRIF NISGQNSSSP ASHAPVGLNA NNETSMTNAS GGKAAQAENI 120
121 VGSVSNLKDT QGYPVSETNY DIRVRAKKQR CINSLGINTN GLIAMGLDRN KHDSSLQIWD 180
181 MNYHDDSHET INPMFSYCTN ESIVSLKFLN DTSVLAASTK FLKEIDVRSP NPIYQHPTRL 240
241 TYDIKLNPFN DWQFSTYGDD GTLAIWDRRK LSDQASLGDL NVASPLLTFE KLVGSGAASR 300
301 KYMNSCFRWS CVRNNEFATL HRGDTIKRWR LGYYCDSNRD IAADDDNEMN IENLFVSSVH 360
361 DTNTMYDRVA TFDYIPRSNN GTSLICMRQS GTIYRMPISE VCSKAILNNR NSLLLSNFEN 420
421 TEIDEIRVNN EHEKSNLENV KTILKNLSFE DLDVSEDYFP SGHDEPNNEI EYSELSE
|
| Detection Method: |  |
| Confidence: | 37.39794 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.407313201902664 | bayes_pls_golite062009 |
| protein binding | 0.0109071915022965 | bayes_pls_golite062009 |
|
Region A: Residues: [478-621] |
1 11 21 31 41 51
| | | | | |
1 EENEGSNDVL DSKRGFELFW KPEKLLEKDI SVIMRTRASL GYGLDPMNTV EMIDSSKNLQ 60
61 NNAYIRNTWR WIAIAKASVD DGTMVSGDLD LGYEGVIGIW NGINGISNQD RYRQETILSD 120
121 KQLNKEMEKI IKLRRKNRDR NSPI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [622-738] |
1 11 21 31 41 51
| | | | | |
1 ANAAGSPKYV QRRLCLIISG WDLSRSDYED KYNIIMKNGH YEKAAAWAVF FGDIPKAVEI 60
61 LGSAKKERLR LIATAIAGYL AYKDLPGNNA WRQQCRKMSS ELDDPYLRVI FAFIADN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [739-807] |
1 11 21 31 41 51
| | | | | |
1 DWWDILYEPA ISLRERLGVA LRFLNDTDLT TFLDRTSSTV IENGELEGLI LTGITPNGID 60
61 LLQSYVNKT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [808-1038] |
1 11 21 31 41 51
| | | | | |
1 SDVQSAALIS IFGSPRYFRD QRVDEWIQTY RDMLKSWELF SMRARFDVLR SKLSRTKTGV 60
61 LTADIKPRQI YIQCQNCKQN INTPRTSSPS SAVSTSAGNY KNGEAYRRNN ADYKKFNTGS 120
121 SEAQAADEKP RHKYCCPHCG SSFPRCAICL MPLGTSNLPF VINGTQSRDP MQTEDSQDGA 180
181 NRELVSRKLK LNEWFSFCLS CNHGMHAGHA EEWFDRHNVC PTPGCTCQCN K
|
| Detection Method: | |
| Confidence: | 3.72 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
