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View Structure Prediction Details

Protein: gi|30725648, gi|...
Organism: Arabidopsis thaliana
Length: 405 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30725648, gi|....

Description E-value Query
Range
Subject
Range
gi|21594999 - gi|21594999|gb|AAM66063.1| transaldolase ToTAL2 [Arabidopsis thaliana]
438.0 [0..1] [405..1]

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Predicted Domain #1
Region A:
Residues: [1-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLSLQSPPC ATLSASIRKG RWKTLAAGFS VTPLPAVNFS LRRSIPRILA SASSSSSPAS  60
   61 SSLEAGENNE LNAVSAFSEI VPDTVVFDDF ERFPPTAATV SSALLLGICG LPDTIFRNAV 120
  121 DMALADSSCA GLETTESRLS CFFNKAIVNV GGDLVKLVPG RVSTEVDARL AYDTNGIIRK 180
  181 VHDLLRLYNE IDVPHDRLLF KIPATWQGIE AARLLESEGI QTHMTFVYSF AQAAAASQAG 240
  241 ASVIQIFVGR LRDWARNHSG DTEIESAIKS GEDPGLALVK RSYNYIHKYG YKSKLMAAAV 300
  301 RNKQDLFSLL GVDYVIAPLK VLQSLKDSPA IPDDEKYSFV RKLTPETATH YHFTNKELVK 360
  361 WDQLSLASSM GPASVELLSA GVEGYANQAK RVEELFGKIW PPPNV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 116.0
Match: 1f05A
Description: Transaldolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity, transferring aldehyde or ketonic groups 3.28746773527289 bayes_pls_golite062009
transaldolase activity 2.77878684721788 bayes_pls_golite062009
catalytic activity 2.67031204377352 bayes_pls_golite062009
fructose-bisphosphate aldolase activity 2.03916133349076 bayes_pls_golite062009
fructose binding 1.42916270771409 bayes_pls_golite062009
porphobilinogen synthase activity 0.658378297259497 bayes_pls_golite062009
binding 0.467753048702448 bayes_pls_golite062009
transferase activity 0.464721888799972 bayes_pls_golite062009
aldehyde-lyase activity 0.351872954170322 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 0.0319140634878892 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle