| Protein: | DRB1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 419 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DRB1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
213.0 | [0..1] | [268..1] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MTSTDVSSGV SNCYVFKSRL QEYAQKYKLP TPVYEIVKEG PSHKSLFQST VILDGVRYNS 60
61 LPGFFNRKAA EQSAAEVALR ELAKSSELSQ CVSQPVHETG LCKNLLQEYA QKMNYAIPLY 120
121 QCQKVETLGR VTQFTCTVEI GGIKYTGAAT RTKKDAEISA GRTALLAIQS DTK
|
| Detection Method: |  |
| Confidence: | 22.0 |
| Match: | 1qu6A |
| Description: | dsRNA-dependent protein kinase pkr |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.602312874472495 | bayes_pls_golite062009 |
|
Region A: Residues: [174-284] |
1 11 21 31 41 51
| | | | | |
1 NNLANYNTQL TVLPCEKKTI QAAIPLKETV KTLKARKAQF KKKAQKGKRT VAKNPEDIII 60
61 PPQPTDHCQN DQSEKIETTP NLEPSSCMNG LKEAAFGSVE TEKIETTPNL E
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.539 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.409 | N/A | N/A | c.30.1 | PreATP-grasp domain |
| View | Download | 0.398 | N/A | N/A | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.380 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.348 | N/A | N/A | a.24.11 | Bacterial GAP domain |
|
Region A: Residues: [285-419] |
1 11 21 31 41 51
| | | | | |
1 PPSCMNGLKE AAFGSVETEK IETTPNLEPP SCMNGLKEAA FGSVETEKIE TTPNLEPSSC 60
61 MNGLKEAAFG SVETEKIETT PNLEPPSCMN GLKEAAFGSV ETEKIETTPN LESSSCMSGL 120
121 KEAAFGSVET EASHA
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1zy7A |
| Description: | Crystal structure of the catalytic domain of an adenosine deaminase that acts on RNA (hADAR2) bound to inositol hexakisphosphate (IHP) |
Matching Structure (courtesy of the PDB): |
|
