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View Structure Prediction Details

Protein: gi|25372784, gi|...
Organism: Arabidopsis thaliana
Length: 254 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25372784, gi|....

Description E-value Query
Range
Subject
Range
gi|50748592 - gi|50748592|ref|XP_421316.1| PREDICTED: similar to calmodulin 1; Calmodulin 1 (phosphorylase kinase,...
205.0 [0..103] [246..515]

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Predicted Domain #1
Region A:
Residues: [1-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGESEGES SGSERESSSS SSGNESEPTK GTISKYEKQR LSRIAENKAR LDALGISKAA  60
   61 KALLSPSPVS KKRRVKRNSG EEDDDYTPVI ADGDGDEDDD EVEEIDEDEE FLCKRKNKSS 120
  121 ASKRKVSSRK ILNTSVSLGE DDDDLDKAIA LSLQGSVAGS DKEAATMKKK RPELMSKTQM 180
  181 TQDELVMYFC QFDEGGKGFI TLRDVAKMAT VHDFTWTEEE LQDMIRCFDM DKDGKLSLDE 240
  241 FRKIVSRCRM LKGS

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Detection Method: PSI-BLAST
Confidence: 23.154902
Match: 1i84U
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.482343911625985 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle