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View Structure Prediction Details

Protein: ACLB2_ARATH
Organism: Arabidopsis thaliana
Length: 608 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACLB2_ARATH.

Description E-value Query
Range
Subject
Range
gi|73965877 - gi|73965877|ref|XP_861212.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)...
567.0 [0..4] [606..500]

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Predicted Domain #1
Region A:
Residues: [1-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGQLFSRT TQALFYNYKQ LPVQRMLDFD FLCGRETPSV AGIINPGSEG FQKLFFGQEE  60
   61 IAIPVHAAIE AACAAHPTAD VFINFASFRS AAASSMAALK QPTIKVVAII AEGVPESDTK 120
  121 QLIAYARANN KVVIGPATVG GIQAGAFKIG DTAGTIDNII QCKLYRPGSV GFVSKSGGMS 180
  181 NEMYNTVARV TDGIYEGIAI GGDVFPGSTL SDHILRFNNI PQIKMMVVLG E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.154902
Match: 1jkjA
Description: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain; Succinyl-CoA synthetase, alpha-chain, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.79741889688267 bayes_pls_golite062009
fatty acid synthase activity 1.23679054027553 bayes_pls_golite062009
oxidoreductase activity 0.9367410227151 bayes_pls_golite062009
3-oxoacyl-[acyl-carrier-protein] reductase activity 0.604742541607263 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.418775403210681 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.32207755075663 bayes_pls_golite062009
nucleic acid binding 0.100470710829263 bayes_pls_golite062009
DNA binding 0.0870043837215047 bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity 0.00644214957417527 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [232-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGGRDEYSLV EALKEGKVNK PVVAWVSGTC ARLFKSEVQF GHAGAKSGGE MESAQAKNQA  60
   61 LIDAGAIVPT SFEALESAIK ETFEKLVEEG KVSPIKEVIP PQIPEDLNSA IKSGKVRAPT 120
  121 HIISTISDDR GEEPCYAGVP MSSIIEQGYG VGDVISLLWF KRSLPRYCTK FIEICIMLCA 180
  181 DHGPCVSGAH NTIVTARAGK DLVSSLVSGL LTIGPRFGGA IDDAARYFKD ACDRNLTPYE 240
  241 FVEGMKKKGI RVPGIGHRIK 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.67
Match: 2ifcA
Description: No description for 2ifcA was found.

Predicted Domain #3
Region A:
Residues: [492-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRDNRDKRVE LLQKFARSNF PSVKYMEYAV TVETYTLSKA NNLVLNVDGA IGSLFLDLLA  60
   61 GSGMFTKQEI DEIVQIGYLN GLFVLARSIG LIGHTFDQKR LKQPLYRHPW EDVLYTK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 92.30103
Match: 1k3pA
Description: Citrate synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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