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View Structure Prediction Details

Protein: GAOX3_ARATH
Organism: Arabidopsis thaliana
Length: 380 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAOX3_ARATH.

Description E-value Query
Range
Subject
Range
gi|213876867, gi... - gi|8919865|emb|CAB96202.1| gibberellin 20-oxidase [Citrus sinensis x Poncirus trifoliata], gi|213876...
391.0 [0..1] [380..1]

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Predicted Domain #1
Region A:
Residues: [1-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATECIATVP QIFSENKTKE DSSIFDAKLL NQHSHHIPQQ FVWPDHEKPS TDVQPLQVPL  60
   61 IDLAGFLSGD SCLASEATRL VSKAATKHGF FLITNHGVDE SLLSRAYLHM DSFFKAPACE 120
  121 KQKAQRKWGE SSGYASSFVG RFSSKLPWKE TLSFKFSPEE KIHSQTVKDF VSKKMGDGYE 180
  181 DFGKVYQEYA EAMNTLSLKI MELLGMSLGV ERRYFKEFFE DSDSIFRLNY YPQCKQPELA 240
  241 LGTGPHCDPT SLTILHQDQV GGLQVFVDNK WQSIPPNPHA FVVNIGDTFM ALTNGRYKSC 300
  301 LHRAVVNSER ERKTFAFFLC PKGEKVVKPP EELVNGVKSG ERKYPDFTWS MFLEFTQKHY 360
  361 RADMNTLDEF SIWLKNRRSF 

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Detection Method: PSI-BLAST
Confidence: 87.30103
Match: 2brtA
Description: No description for 2brtA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.588242505102319 bayes_pls_golite062009
nucleic acid binding 0.0678642854814351 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle