YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: TRXH7_ARATH
Organism: Arabidopsis thaliana
Length: 129 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRXH7_ARATH.

Description E-value Query
Range
Subject
Range
gi|27466896 - gi|27466896|gb|AAO12855.1| thioredoxin h [Pisum sativum]
128.0 [0..1] [128..1]

Back

Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSNVSSVHD VHSSMEITSN GFVVEIESRR QWKSLFDSMK GSNKLLVIDF TAVWCGPCKA  60
   61 MEPRVREIAS KYSEAVFARV DVDRLMDVAG TYRAITLPAF VFVKRGEEID RVVGAKPDEL 120
  121 VKKIEQHRV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 1xflA
Description: Solution Structure of Thioredoxin h1 from Arabidopsis Thaliana
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
antioxidant activity 3.8464796631544 bayes_pls_golite062009
peroxidase activity 3.43831566988273 bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor 3.43831566988273 bayes_pls_golite062009
glutathione peroxidase activity 2.56524997297011 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 2.23310780102446 bayes_pls_golite062009
peroxiredoxin activity 2.12777217096121 bayes_pls_golite062009
selenium binding 1.97148144306198 bayes_pls_golite062009
thioredoxin peroxidase activity 1.96134566495756 bayes_pls_golite062009
protein disulfide oxidoreductase activity 1.47769936616412 bayes_pls_golite062009
disulfide oxidoreductase activity 1.32811008894503 bayes_pls_golite062009
binding 1.25802922431343 bayes_pls_golite062009
transcription regulator activity 0.96297634785608 bayes_pls_golite062009
catalytic activity 0.672192331361968 bayes_pls_golite062009
hydrolase activity 0.620302638089385 bayes_pls_golite062009
glutathione binding 0.2456976890622 bayes_pls_golite062009
protein binding 0.134341907247724 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle