Protein: | PABN3_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 217 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PABN3_ARATH.
Description | E-value | Query Range |
Subject Range |
|
183.0 | [0..1] | [217..202] |
Region A: Residues: [1-217] |
1 11 21 31 41 51 | | | | | | 1 MEEEEHEVYG GEIPEVGDTD VPDPDIDMSA ADEDAVTELA EMKRRLKEME EEAAALREMQ 60 61 AKVEKEMGAT QDPASMAANQ EGKEEVDARS VYVGNVDYAC TPEEVQLHFQ TCGTVNRVTI 120 121 LMDKFGQPKG FAYVEFVEVE AVQEALQLNE SELHGRQLKV SPKRTNVPGM KQYHPGRFNP 180 181 SMGYRFRRPF VPPYFYSPYG YGKAPRFRRP MRYMPYQ |
Detection Method: | |
Confidence: | 33.045757 |
Match: | 1pgzA |
Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.950788308762215 | bayes_pls_golite062009 |
nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |