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View Structure Prediction Details

Protein: GLPK_ARATH
Organism: Arabidopsis thaliana
Length: 522 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLPK_ARATH.

Description E-value Query
Range
Subject
Range
GLPK2_THEMA, GLK... - Glycerol kinase 2 OS=Thermotoga maritima GN=glpK2 PE=3 SV=2, (Q9X1E4) Glycerol kinase 2 (EC 2.7.1.30...
GLPK2_THEMA - Glycerol kinase 2 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=glpK2 ...
592.0 [0..5] [519..1]

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Predicted Domain #1
Region A:
Residues: [1-522]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKENGFIGS IDQGTTSTRF IIYDHDARPV ASHQVEFTQF YPEAGWVEHD PMEILESVKV  60
   61 CIAKALDKAT ADGHNVDGGL KAIGLTDQRE TTVVWSKSTG LPLHKAIVWM DARTSSICRR 120
  121 LEKELSGGRS HFVESCGLPI STYFSAMKLL WLMENVDDVK DAIKKGDAIF GTIDTWLIWN 180
  181 MTGGINGGLH VTDVTNASRT MLMNLKTLSW DQDTLKTLGI PAEILPKIVS NSEVIGEICK 240
  241 GWPIPGIKIA GCLGDQHAAM LGQACRKGEA KSTYGTGAFI LLNTGEVPIK SGHGLLTTLA 300
  301 YKLGPQAQTN YALEGSIAIA GAAVQWLRDS LGIIKSASEI EDLAAMVDST GGVYFVPAFN 360
  361 GLFAPWWRED ARGVCIGITR FTNKSHIARA VLESMCFQVK DVLDSMNKDA GEKGSLNNGK 420
  421 GEFLLRVDGG ATANNLLMQI QADLMGSPVV RPVDIETTAL GAAYAAGLAV GFWKEADIFE 480
  481 SGEKAKNSKV FRPAMEEGIR KKKVASWCKA VERTFDLADL SI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 157.0
Match: 2p3rA
Description: No description for 2p3rA was found.

Predicted functions:

Term Confidence Notes
glycerol kinase activity 8.42421332766313 bayes_pls_golite062009
carbohydrate kinase activity 2.33338276303563 bayes_pls_golite062009
hexokinase activity 1.70516840340504 bayes_pls_golite062009
glucose binding 1.58717365638543 bayes_pls_golite062009
binding 1.44744777288539 bayes_pls_golite062009
protein binding 0.704303457266874 bayes_pls_golite062009
glucokinase activity 0.47468456642723 bayes_pls_golite062009
sugar binding 0.44352406324938 bayes_pls_golite062009
nucleic acid binding 0.413093555819235 bayes_pls_golite062009
kinase activity 0.345540463799773 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.324655711623803 bayes_pls_golite062009
catalytic activity 0.296484721581333 bayes_pls_golite062009
transcription regulator activity 0.285445761922116 bayes_pls_golite062009
DNA binding 0.279711618446837 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.214617425075414 bayes_pls_golite062009
monosaccharide binding 0.20435276425198 bayes_pls_golite062009
transferase activity 0.105619024604158 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle