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View Structure Prediction Details

Protein: gi|26450279, gi|...
Organism: Arabidopsis thaliana
Length: 139 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|26450279, gi|....

Description E-value Query
Range
Subject
Range
gi|7487436, gi|1... - pir||T02564 hypothetical protein At2g32650 [imported] - Arabidopsis thaliana, gi|42571021|ref|NP_97...
154.0 [0..1] [139..1]

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Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLIMTTPF PGSVTTCKKT NNLSVQRAFR VTCMQTEKPL EELYNVKVER KVSQKRLEEL  60
   61 GV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [63-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRWSVWKTGK CKLPWDWQVD QLVYIEQGEV RVVPEGSKRY MQFLAGDLVR YPKWLEADLF  60
   61 FNAPYIERYC FKAYGDD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.69897
Match: 1o5uA
Description: Crystal structure of a novel Thermotoga maritima enzyme (TM1112) from Thermotoga maritima at 1.83 A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle