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View Structure Prediction Details

Protein: gi|7362792, gi|2...
Organism: Arabidopsis thaliana
Length: 687 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7362792, gi|2....

Description E-value Query
Range
Subject
Range
gi|6630454 - gi|6630454|gb|AAF19542.1|AC007190_10 F23N19.18 [Arabidopsis thaliana]
814.0 [0..18] [686..1037]

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Predicted Domain #1
Region A:
Residues: [1-687]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVELSFSQLL VLLLSLLFLF TTLASSSKTP RFKYSLEKPH HPLDPLTTPE IKRVQTILSG  60
   61 HDPGFGSGST IIHAMALDEP DKQRVIRWKK GDRLPPRRAE ILAMSNGESH VLTVDLKSGR 120
  121 VVSDLVNPTF GYPILTMKDI IAVSQVPYKS VEFNRSIEAR GIPFSGLICI TPFAGWYGPD 180
  181 EEGRRVIKIQ CFSKQDTVNF YMRPIEGLYL TVDMDKLEII KIVDNGPVPV PKSTGTEYRY 240
  241 GFLNETVYMD RVNPMSMEQP DGPSFQVEDG YLVKWANWKF HIKPDQRAGM IISQATVRDS 300
  301 KTGEARSVMY KGFASELFVP NMDPGEGWYS KAYMDAGEFG LGPSSMPLVP LNDCPRNAYY 360
  361 IDGFFASPEG IPILQPNMIC LFERYAGDTS WRHSEILLPG VDIRESRAKV TLVARMACSV 420
  421 GNYDYIFDWE FQMDGVIRVT VAASGMLMVK GTAYENVEDL GEKEDDSGPL ISENVIGVVH 480
  481 DHFISFHLDM DIDGSANNSF VKVHLEKQRL PPGESRRKSY LKVKKYVAKT EKDAQIKMSL 540
  541 YDPYEFHLVN PNRLSRLGNP AGYKLVPGGN AASLLDHDDP PQMRGAFTNN QIWVTRYNRS 600
  601 EQWAGGLLMY QSRGEDTLQV WSDRDRSIEN KDIVLWYTLG FHHVPCQEDF PVMPTIASSF 660
  661 ELKPVNFFES NPVLGISPFF EKDLPVC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1w2zA
Description: PSAO and Xenon
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
copper ion binding 1.78083444022234 bayes_pls_golite062009
binding 1.52650749686101 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors 1.04273547518 bayes_pls_golite062009
cation binding 0.886809852927978 bayes_pls_golite062009
metal ion binding 0.886809852927978 bayes_pls_golite062009
ion binding 0.880849428582846 bayes_pls_golite062009
catalytic activity 0.672290280263588 bayes_pls_golite062009
transition metal ion binding 0.668245465199827 bayes_pls_golite062009
amine oxidase activity 0.454088447479247 bayes_pls_golite062009
protein binding 0.326999823218261 bayes_pls_golite062009
oxidoreductase activity 0.208879786598677 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle