YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: NUDT4_ARATH
Organism: Arabidopsis thaliana
Length: 207 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUDT4_ARATH.

Description E-value Query
Range
Subject
Range
NUD21_ARATH - Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1
142.0 [0..7] [198..3]

Back

Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGFSVSLFV SNLSNVASYL SPIFENIPST KVVPAQIEKV VSLVSRTGRD LQRYDHAGYR  60
   61 QVVGCVPYRY KKQEVNGVET QVIQVLLVSA QKGKGMLFPK GGWETDESME EAALRETIEE 120
  121 AGVTGELEEK LGKWQYKSKR HSIIHDGYMF ALLVSQEFER WPEAEMRQRR WVSLDEAREV 180
  181 CQNWWMREAL EAFINLKCLA DDDESGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.69897
Match: 2fvvA
Description: No description for 2fvvA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 1.49075808737475 bayes_pls_golite062009
nucleic acid binding 0.654571025500586 bayes_pls_golite062009
binding 0.648929968265004 bayes_pls_golite062009
hydrolase activity 0.214635043348567 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle