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View Structure Prediction Details

Protein: gi|7445540, gi|2...
Organism: Arabidopsis thaliana
Length: 358 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7445540, gi|2....

Description E-value Query
Range
Subject
Range
gi|21537069 - gi|21537069|gb|AAM61410.1| aldose 1-epimerase-like protein [Arabidopsis thaliana]
374.0 [0..1] [358..1]

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Predicted Domain #1
Region A:
Residues: [1-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKKQSPLHV VGVSVLMVLL CSVNYSLCEK IKTYKLTRGS LSVTFTNYGA VMTSLLLPDR  60
   61 HGKQDDVVLG FDTVDGYKND TTYFGAIVGR VANRIGGAKF KLNGHLYKTD PNEGRNTLHG 120
  121 GSKGFSDVIW SVQKYVPTSH ITFTYDSFDG EEGFPGNVTV KVTYMLIGEN KLGVKMEAKP 180
  181 LNKPTPINLA LHTYWNLHSH NSGNILSHKI QLLAGKITPV DDKLIPTGEI TSITGTPYDF 240
  241 LEPREIGSRI HELPGGYDIN YVIDGPIGKH LRKTAVVTEQ VTGRKMELWT NQPGVQFYTS 300
  301 NMMKRVVGKG KAVYEKYGGL CLETQGFPDS VNHKNFPSQI VNPGESYLHV MLFRFTAH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.0
Match: 1snzA
Description: Crystal structure of apo human galactose mutarotase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
aldose 1-epimerase activity 2.85100059704396 bayes_pls_golite062009
catalytic activity 0.770933849734279 bayes_pls_golite062009
racemase and epimerase activity, acting on carbohydrates and derivatives 0.68102716507433 bayes_pls_golite062009
racemase and epimerase activity 0.473636146090495 bayes_pls_golite062009
UDP-glucose 4-epimerase activity 0.46846097606394 bayes_pls_golite062009
binding 0.381228414514023 bayes_pls_golite062009
isomerase activity 0.106573908779409 bayes_pls_golite062009
protein binding 0.078592895113726 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle