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View Structure Prediction Details

Protein: gi|7484996, gi|7...
Organism: Arabidopsis thaliana
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7484996, gi|7....

Description E-value Query
Range
Subject
Range
gi|14596171, gi|... - gi|18377522|gb|AAL66927.1| H+-transporting ATP synthase-like protein [Arabidopsis thaliana], gi|1459...
138.0 [0..1] [219..1]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANSIMASS KPLISLSSNQ QPNRVQIPKF AKLPQIPKSL TSSTDLRSKA LSLSSATAKS  60
   61 LALIAAFAPP SMAEAMEKAQ LF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DFNLTLPIIV VEFLFLMFAL DKVYYSPLGN FMDQRDASIK EKLASVKDTS TEVKELDEQA  60
   61 AAVMRAARAE IAAALNKMKK ETQVEVEEKL AEGRKKVEEE LKEALASLES QKEETIKALD 120
  121 SQIAALSEDI VKKVLPS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle