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View Structure Prediction Details

Protein: gi|7484996, gi|7...
Organism: Arabidopsis thaliana
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7484996, gi|7....

Description E-value Query
Range
Subject
Range
gi|14596171, gi|... - gi|18377522|gb|AAL66927.1| H+-transporting ATP synthase-like protein [Arabidopsis thaliana], gi|1459...
138.0 [0..1] [219..1]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANSIMASS KPLISLSSNQ QPNRVQIPKF AKLPQIPKSL TSSTDLRSKA LSLSSATAKS  60
   61 LALIAAFAPP SMAEAMEKAQ LF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DFNLTLPIIV VEFLFLMFAL DKVYYSPLGN FMDQRDASIK EKLASVKDTS TEVKELDEQA  60
   61 AAVMRAARAE IAAALNKMKK ETQVEVEEKL AEGRKKVEEE LKEALASLES QKEETIKALD 120
  121 SQIAALSEDI VKKVLPS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle