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View Structure Prediction Details

Protein: SCP50_ARATH
Organism: Arabidopsis thaliana
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP50_ARATH.

Description E-value Query
Range
Subject
Range
gi|9757669, gi|3... - gi|9757669|dbj|BAB08188.1| unnamed protein product [Oryza sativa Japonica Group], ref|NP_909340.1| p...
402.0 [0..17] [441..37]

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Predicted Domain #1
Region A:
Residues: [1-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQATTLFIL LSTLLLAVSV ESPQPPLFPD EALPTKSGYL PVKPAPGSSM FYAFYEAQEP  60
   61 TTPLPDTPLL VWLQGGPGCS SMIGNFYELG PWRVVSRATD LERNPGAWNR LFGLLFVDNP 120
  121 IGVGFSIAAS QQDIPTNQRQ VAEHLYAALV EFLEQNPSFE NRPVYFTGES YAGKYVPAIG 180
  181 YYILKEKPNG KVNLKGLAIG NGLTDPVTQV QTHAVNVYYS GLVNAKQRVE LQKAQEISVA 240
  241 LVKSQKWREA ADARTELLTL LSNMTGLATL YNTARAIPYR TDLVVDLLNQ REAKRVLGVS 300
  301 ETVRFEECSD EVEDVLRADV MKSVKFMVEY ALERTQVLLY QGMLDLRDGV VSTEEWMKTM 360
  361 NWSGLGMFST AERRVWKDED GVVAGYVQRW GNLCHVAVTG AGHFVPTDKA VNSRDMIEGW 420
  421 VLGKGLFGGK DVKQTTSSSL YHSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.045757
Match: 1wpxA
Description: Crystal structure of carboxypeptidase Y inhibitor complexed with the cognate proteinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.3250951453762 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.815337671271829 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
endopeptidase activity 0.43631945855397 bayes_pls_golite062009
binding 0.351031277062254 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle