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View Structure Prediction Details

Protein: gi|14030631, gi|...
Organism: Arabidopsis thaliana
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|14030631, gi|....

Description E-value Query
Range
Subject
Range
gi|77164961, gi|... - gi|77164961|ref|YP_343486.1| hypothetical protein Noc_1469 [Nitrosococcus oceani ATCC 19707], gi|768...
gi|207089993 - gi|207089993|gb|EDZ67264.1| hypothetical protein NOC27_591 [Nitrosococcus oceani AFC27]
gi|224410339, gi... - gi|254433660|ref|ZP_05047168.1| hypothetical protein NOC27_591 [Nitrosococcus oceani AFC27], gi|2244...
323.0 [0..4] [324..12]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSGVDETS ESGAFVRTAS TFRNFVSQDP DSQFPAESGR YHLYISYACP WACRCLSYLK  60
   61 IKGLDEAITF SSVHAIWGRT KETDDHRGWV FPDSDTELPG AEPDYLNGAK SVRELYEIAS 120
  121 PNYEGKYTVP VLWDKKLKTV VNNESSEIIR MFNTEFNGIA KTPSLDLYPS HLRDVINETN 180
  181 GWVFNGINNG VYKCGFARKQ EPYNEAVNQL YEAVDRCEEV LGKQRYICGN TFTEADIRLF 240
  241 VTLIRFDEVY AVHFKCNKRL LREYPNIFNY IKDIYQIHGM SSTVNMEHIK QHYYGSHPTI 300
  301 NPFGIIPHGP NIDYSSPHDR DRFSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.09691
Match: 1e6bA
Description: Class zeta GST
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
glutathione binding 2.07086805531749 bayes_pls_golite062009
glutathione transferase activity 1.85683051472829 bayes_pls_golite062009
antioxidant activity 1.78836688224506 bayes_pls_golite062009
peroxidase activity 1.62851025934188 bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor 1.62851025934188 bayes_pls_golite062009
binding 1.1101496519064 bayes_pls_golite062009
glutathione peroxidase activity 1.08052084417939 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 1.0279404567142 bayes_pls_golite062009
catalytic activity 0.672192331361968 bayes_pls_golite062009
peroxiredoxin activity 0.366096607480921 bayes_pls_golite062009
protein binding 0.341730456502484 bayes_pls_golite062009
selenium binding 0.237008126838281 bayes_pls_golite062009
thioredoxin peroxidase activity 0.163136748643487 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle