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View Structure Prediction Details

Protein: ILL4_ARATH
Organism: Arabidopsis thaliana
Length: 440 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ILL4_ARATH.

Description E-value Query
Range
Subject
Range
gi|2181184 - gi|2181184|emb|CAA73905.1| JR3 protein [Arabidopsis thaliana]
394.0 [0..1] [440..1]

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Predicted Domain #1
Region A:
Residues: [1-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE  60
   61 LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH APFVALRADM DALAMQEMVE 120
  121 WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE 180
  181 AGVLENVSAI FGLHVTNQLA LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL 240
  241 AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL 300
  301 KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM 360
  361 QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY FEVNEELLPY GASLHASMAT 420
  421 RYLLELKAST LNKSNKKDEL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.39794
Match: 1xmbA
Description: X-RAY STRUCTURE OF IAA-AMINOACID HYDROLASE FROM ARABIDOPSIS THALIANA GENE AT5G56660
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.0609849976664 bayes_pls_golite062009
peptidase activity 3.04706302825019 bayes_pls_golite062009
catalytic activity 2.3710874246093 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.30644893326426 bayes_pls_golite062009
exopeptidase activity 1.25673143627992 bayes_pls_golite062009
carboxypeptidase activity 0.76593160329727 bayes_pls_golite062009
succinyl-diaminopimelate desuccinylase activity 0.0189053170666407 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle