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View Structure Prediction Details

Protein: gi|20334730, gi|...
Organism: Arabidopsis thaliana
Length: 448 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20334730, gi|....

Description E-value Query
Range
Subject
Range
gi|6730739, gi|1... - gi|6730739|gb|AAF27129.1|AC018849_17 hypothetical protein; 58060-60358 [Arabidopsis thaliana], gi|51...
318.0 [0..1] [448..1]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLLKLDIA TTFLAFIVPR ANTSLNHRFA SARLSTATVS LRTKSSSFYS AALYSDSRRR  60
   61 FHSAVASDSS LAVVDDEDIF DVASEILPD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.522879
Match: 2j289
Description: No description for 2j289 was found.

Predicted Domain #2
Region A:
Residues: [90-448]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRIPATIITG FLGSGKTTLL NHILTGDHGK RIAVIENEFG EVDIDGSLVA AQTAGAEDIM  60
   61 MLNNGCLCCT VRGDLVRMIS EMVQTKKGRF DHIVIETTGL ANPAPIIQTF YAEDEIFNDV 120
  121 KLDGVVTLVD AKHARLHLDE VKPEGYVNEA VEQIAYADRI IVNKTDLVGE PELASVMQRI 180
  181 KTINSMAHMK RTKYGKVDLD YVLGIGGFDL ERIESSVNEE EKEDREGHDD HHHGHDCHDH 240
  241 HNEHEHEHEH EHHHSHDHTH DPGVGSVSIV CEGDLDLEKA NMWLGALLYQ RSEDIYRMKG 300
  301 ILSVQDMDER FVFQGVHEIF EGSPDRLWRK DETRTNKIVF IGKNLNREEL EMGFRACLI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.69897
Match: 1nijA
Description: Hypothetical protein YjiA, N-terminal domain; Hypothetical protein YjiA, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.626981987734364 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.420384345567397 bayes_pls_golite062009
pyrophosphatase activity 0.411077559082206 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.399864241228259 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.398496265411009 bayes_pls_golite062009
catalytic activity 0.234613562021476 bayes_pls_golite062009
hydrolase activity 0.216831145240405 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle