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View Structure Prediction Details

Protein: NADC_ARATH
Organism: Arabidopsis thaliana
Length: 348 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NADC_ARATH.

Description E-value Query
Range
Subject
Range
gi|7024457 - gi|7024457|dbj|BAA92153.1| quinolinate phosphoribosyltransferase [Nicotiana tabacum]
354.0 [0..2] [348..5]

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Predicted Domain #1
Region A:
Residues: [1-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISVSRFLSP QFYAIPRSFV KMSASATQTA GEVSMGIKPP SHPTYDLKAV IKLALAEDAG  60
   61 HTGDVTCMAT IPFDMEVEAY FLAKEDGIVA GVALADMIFE HVDPSLKVEW MRKDGDYVHK 120
  121 GLKFGKVSGN AHKIVVAERV LLNFMQRMSG IATLTKLMAD AASPACILET RKTAPGLRLV 180
  181 DKWAVLIGGG RNHRMGLFDM VMIKDNHISA AGGIVNAVKS VDEYLKQKNL EMDVEVETRT 240
  241 LEEVKEVLEY ASGSETRLTR IMLDNMVVPL ENGDVDVTML KDAVELINGR FETEASGNVT 300
  301 LETVHKIGQS GVTFISSGAL THSVKALDIS LKIDTELALE VGRRTKRA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.09691
Match: 1qapA
Description: Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain; Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nicotinate phosphoribosyltransferase activity 3.4096751090496 bayes_pls_golite062009
nicotinate-nucleotide diphosphorylase (carboxylating) activity 3.12788282156037 bayes_pls_golite062009
binding 1.58263447797054 bayes_pls_golite062009
catalytic activity 0.60409960326459 bayes_pls_golite062009
protein binding 0.502035039039958 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle