| Protein: | GDI2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 444 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDI2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
398.0 | [0..1] | [442..1] |
|
Region A: Residues: [1-444] |
1 11 21 31 41 51
| | | | | |
1 MDEEYEVIVL GTGLKECILS GLLSVDGVKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK 60
61 APEHLGASRD YNVDMMPKFM MGNGKLVRTL IHTDVTKYLS FKAVDGSYVF VKGKVQKVPA 120
121 TPMEALKSSL MGIFEKRRAG KFFSFVQEYD EKDPKTHDGM DLTRVTTKEL IAKYGLDGNT 180
181 IDFIGHAVAL HTNDQHLDQP AFDTVMRMKL YAESLARFQG TSPYIYPLYG LGELPQAFAR 240
241 LSAVYGGTYM LNKPECKVEF DEGGKVIGVT SEGETAKCKK IVCDPSYLPN KVRKIGRVAR 300
301 AIAIMSHPIP NTNDSHSVQV IIPQKQLARK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET 360
361 DNPQTELKPG TDLLGPVDEI FFDMYDRYEP VNEPELDNCF ISTSYDATTH FETTVADVLN 420
421 MYTLITGKQL DLSVDLSAAS AAEE
|
| Detection Method: |  |
| Confidence: | 111.0 |
| Match: | 1lv0A |
| Description: | Crystal structure of the Rab effector guanine nucleotide dissociation inhibitor (GDI) in complex with a geranylgeranyl (GG) peptide |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small GTPase regulator activity | 1.82777033221452 | bayes_pls_golite062009 |
| GTPase regulator activity | 1.69589677829425 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 1.67690582043816 | bayes_pls_golite062009 |
| binding | 1.28745887296004 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.00883251592654 | bayes_pls_golite062009 |
| amine oxidase activity | 0.93095855430028 | bayes_pls_golite062009 |
| GDP-dissociation inhibitor activity | 0.387378304822822 | bayes_pls_golite062009 |
| protein binding | 0.347133050347128 | bayes_pls_golite062009 |
| transporter activity | 0.0442116448779152 | bayes_pls_golite062009 |
| antioxidant activity | 0.0209903577090486 | bayes_pls_golite062009 |
| transcription regulator activity | 0.00424758775661527 | bayes_pls_golite062009 |
