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View Structure Prediction Details

Protein: SCP11_ARATH
Organism: Arabidopsis thaliana
Length: 433 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP11_ARATH.

Description E-value Query
Range
Subject
Range
SCP3_ARATH - Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1
463.0 [0..3] [433..11]

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Predicted Domain #1
Region A:
Residues: [1-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELTLKLLVL LLFILNHHVG SGSIVKFLPG FEGPLPFELE TGYIGIGEEE EVQLFYYFIK  60
   61 SERNPKEDPL LLWLSGGPGC SSITGLLFQN GPLALKSEVY NGSVPSLVST TYSWTKTANI 120
  121 IFLDQPVGAG FSYSRAPLID TPTDTGEVKR IHEFLQKWLS KHPQFSSNHF YAGGDSYSGM 180
  181 IVPALVQEIS KGNYICCNPP INLKGYVLGN PITHEDDPNY RIPFSHGMAL ISDELYESIR 240
  241 EACKGNYFNV DPRNTKCLKL VEEFHKCTDK LNEFHILSPD CDTASPDCYL YPFYLISFWA 300
  301 NDESVRDALH VNKRSIGKWE RCNYLSKPYN KDIKSSVPYH MNNSVSGYRS LIYSGDHDLV 360
  361 VPFLATQAWI KSLNYSIIDE WRPWMIRDQI TGYTRTYSNK MTFATVKGSG HTAENKPQES 420
  421 FIMFRRWING QPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.221849
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.12335967816646 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.55159061470324 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.815337671271829 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
binding 0.351031277062254 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle