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View Structure Prediction Details

Protein: XXT1_ARATH
Organism: Arabidopsis thaliana
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XXT1_ARATH.

Description E-value Query
Range
Subject
Range
XXT2_ARATH - Xyloglucan 6-xylosyltransferase 2 OS=Arabidopsis thaliana GN=XXT2 PE=1 SV=1
546.0 [0..1] [457..1]

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Predicted Domain #1
Region A:
Residues: [1-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEKCIGAHR FRRLQRFMRQ GKVTILCLVL TVIVLRGTIG AGKFGTPEKD IEEIREHFFY  60
   61 TRKRGEPHRV LVEVSSKTTS SEDGGNGGNS YETFDINKLF VDEGDEEKSR DRTNKPYSLG 120
  121 PKISDWDEQR RDWLKQNPSF P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [142-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFVAPNKPRV LLVTGSAPKP CENPVGDHYL LKSIKNKIDY CRIHGIEIFY NMALLDAEMA  60
   61 GFWAKLPLIR KLLLSHPEIE FLWWMDSDAM FTDMVFELPW ERYKDYNLVM HGWNEMVYDQ 120
  121 KNWIGLNTGS FLLRNSQWSL DLLDAWAPMG PKGKIREEAG KVLTRELKDR PAFEADDQSA 180
  181 MVYLLATERE KWGGKVYLES GYYLHGY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.09691
Match: 2p6wA
Description: No description for 2p6wA was found.

Predicted Domain #3
Region A:
Residues: [349-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WGILVDRYEE MIENHKPGFG DHRWPLVTHF VGCKPCGKFG DYPVERCLRQ MDRAFNFGDN  60
   61 QILQMYGFTH KSLGSRRVKP TRNQTDRPLD AKDEFGLLHP PFKAAKLSTT TT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle