YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: XXT1_ARATH
Organism: Arabidopsis thaliana
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XXT1_ARATH.

Description E-value Query
Range
Subject
Range
XXT2_ARATH - Xyloglucan 6-xylosyltransferase 2 OS=Arabidopsis thaliana GN=XXT2 PE=1 SV=1
546.0 [0..1] [457..1]

Back

Predicted Domain #1
Region A:
Residues: [1-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEKCIGAHR FRRLQRFMRQ GKVTILCLVL TVIVLRGTIG AGKFGTPEKD IEEIREHFFY  60
   61 TRKRGEPHRV LVEVSSKTTS SEDGGNGGNS YETFDINKLF VDEGDEEKSR DRTNKPYSLG 120
  121 PKISDWDEQR RDWLKQNPSF P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [142-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFVAPNKPRV LLVTGSAPKP CENPVGDHYL LKSIKNKIDY CRIHGIEIFY NMALLDAEMA  60
   61 GFWAKLPLIR KLLLSHPEIE FLWWMDSDAM FTDMVFELPW ERYKDYNLVM HGWNEMVYDQ 120
  121 KNWIGLNTGS FLLRNSQWSL DLLDAWAPMG PKGKIREEAG KVLTRELKDR PAFEADDQSA 180
  181 MVYLLATERE KWGGKVYLES GYYLHGY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.09691
Match: 2p6wA
Description: No description for 2p6wA was found.

Predicted Domain #3
Region A:
Residues: [349-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WGILVDRYEE MIENHKPGFG DHRWPLVTHF VGCKPCGKFG DYPVERCLRQ MDRAFNFGDN  60
   61 QILQMYGFTH KSLGSRRVKP TRNQTDRPLD AKDEFGLLHP PFKAAKLSTT TT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle