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View Structure Prediction Details

Protein: gi|30698791, gi|...
Organism: Arabidopsis thaliana
Length: 176 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30698791, gi|....

Description E-value Query
Range
Subject
Range
gi|42572065 - gi|42572065|ref|NP_974123.1| unknown protein [Arabidopsis thaliana]
258.0 [0..1] [131..1]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLGLRLKA AKWTLRSGSG AVSREWSSEM GKGVRRFSTE TENDVPTSGI SRPLAEILKE  60
   61 LNKKVPDSVI RTRVEDGCSI KYIPWHIVNR IMNMHAPEWS GEVRSVTYSP DGNTVTVAYR 120
  121 VTLYGTDAEI FRESTGTTSV DDKGYGDAVQ KAEAMAFRRA CARFGLGLHL YHEDAL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.78
Match: 1kn0A
Description: The homologous-pairing domain of Rad52 recombinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.473490732431909 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle