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View Structure Prediction Details

Protein: gi|25295906, gi|...
Organism: Arabidopsis thaliana
Length: 255 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25295906, gi|....

Description E-value Query
Range
Subject
Range
gi|50907791, gi|... - gi|50907791|ref|XP_465384.1| putative SEC14 cytosolic factor [Oryza sativa (japonica cultivar-group)...
243.0 [0..1] [253..55]

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Predicted Domain #1
Region A:
Residues: [1-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR  60
   61 DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK MCMQGHDKMG RPIAVAIGNR 120
  121 HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ 180
  181 DCYPERLGKL YIVHAPYIFM TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP 240
  241 DIYGGKLPLV PIQET

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.69897
Match: 1auaA
Description: PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P FROM SACCHAROMYCES CEREVISIAE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.227249461084181 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle