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View Structure Prediction Details

Protein: ACCH9_ARATH
Organism: Arabidopsis thaliana
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACCH9_ARATH.

Description E-value Query
Range
Subject
Range
gi|92887246 - gi|92887246|gb|ABE88764.1| 2OG-Fe(II) oxygenase [Medicago truncatula]
343.0 [0..5] [365..10]

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Predicted Domain #1
Region A:
Residues: [1-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEKSAELVR LNELKAFVST KAGVKGLVDT KITEVPRIFH IPSSSTLSNN KPSDIFGLNL  60
   61 TVPIIDLGDG NTSAARNVLV SKIKEAAENW GFFQVINHGI PLTVLKDIKQ GVRRFHEEDP 120
  121 EVKKQYFATD FNTRFAYNTN FDIHYSSPMN WKDSFTCYTC PQDPLKPEEI PLACRDVVIE 180
  181 YSKHVMELGG LLFQLLSEAL GLDSEILKNM DCLKGLLMLC HYYPPCPQPD LTLGISKHTD 240
  241 NSFITILLQD QIGGLQVLHQ DSWVDVTPVP GALVISIGDF MQLITNDKFL SMEHRVRANR 300
  301 DGPRISVACF VSSGVFPNST VYGPIKELLS DENPAKYRDI TIPEYTVGYL ASIFDGKSHL 360
  361 SKFRI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.522879
Match: 2brtA
Description: No description for 2brtA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.588242505102319 bayes_pls_golite062009
nucleic acid binding 0.0678642854814351 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle