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View Structure Prediction Details

Protein: gi|15227497, gi|...
Organism: Arabidopsis thaliana
Length: 268 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15227497, gi|....

Description E-value Query
Range
Subject
Range
gi|15236182, gi|... - pir||T05066 hypothetical protein M3E9.190 - Arabidopsis thaliana, gi|7269490|emb|CAB79493.1| hypoth...
223.0 [0..3] [243..740]

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Predicted Domain #1
Region A:
Residues: [1-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYKHFSHPH TLKLQQIQPH KSSDSSVICS GCESAISESE TAYICSTCDF NLHEQCGNAV  60
   61 RGMQHPSHAG LHHLTLVPYT TYSAGTFLCR ACGCTGGKGF SYCCPLCDFD LHVQCAHLPQ 120
  121 VLVHESHPMH SLLLVYNSTP P

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.3
Match: 1v5nA
Description: Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0196698141692984 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [142-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFTQFGFGN QLVCNLCNMT MDGRFWSYNC YACNYHIHAS CAVNKPNPVA ASAENCGASD  60
   61 EGKTPTAESV PVQGLETEQT EQVAAITEQV EDPVLRQQLE LQKLQLELDM SSALANMIGS 120
  121 FNLSSFV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1xa6A
Description: Crystal Structure of the Human Beta2-Chimaerin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0980674097362609 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle