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View Structure Prediction Details

Protein: BCA6_ARATH
Organism: Arabidopsis thaliana
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BCA6_ARATH.

Description E-value Query
Range
Subject
Range
gi|25404198, gi|... - pir||B96615 probable carbonic anhydrase T18I24.9 [imported] - Arabidopsis thaliana, gi|12321393|gb|...
302.0 [0..1] [290..1]

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Predicted Domain #1
Region A:
Residues: [1-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTLGGRAR RLVSATSVHQ NGCLHKLQQI GSDRFQLGEA KAIRLLPRRT NMVQELGIRE  60
   61 EFMDLNRETE TSYDFLDEMR HRFLKFKRQK YLPEIEKFKA LAIAQSPKVM VIGCADSRVC 120
  121 PSYVLGFQPG EAFTIRNVAN LVTPVQNGPT ETNSALEFAV TTLQVENIIV MGHSNCGGIA 180
  181 ALMSHQNHQG QHSSLVERWV MNGKAAKLRT QLASSHLSFD EQCRNCEKES IKDSVMNLIT 240
  241 YSWIRDRVKR GEVKIHGCYY NLSDCSLEKW RLSSDKTNYG FYISDREIWS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.0
Match: 1ekjA
Description: beta-carbonic anhydrase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
carbonate dehydratase activity 2.96380803089124 bayes_pls_golite062009
catalytic activity 1.85658156053797 bayes_pls_golite062009
carbon-oxygen lyase activity 1.691366175135 bayes_pls_golite062009
hydro-lyase activity 1.65497918079842 bayes_pls_golite062009
lyase activity 1.62374861994341 bayes_pls_golite062009
binding 1.32962036184517 bayes_pls_golite062009
protein binding 0.132818074687599 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle