| Protein: | gi|15241748, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 494 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15241748, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
482.0 | [0..1] | [494..1] |
|
Region A: Residues: [1-285] |
1 11 21 31 41 51
| | | | | |
1 MDGSSEKTTN KLVSILPNYR IGKTLGHGSF AKVKLALHVA TGHKVAIKIL NRSKIKNMGI 60
61 EIKVQREIKI LRFLMHPHII RQYEVIETPN DIYVVMEYVK SGELFDYIVE KGKLQEDEAR 120
121 HLFQQIISGV EYCHRNMIVH RDLKPENVLL DSQCNIKIVD FGLSNVMHDG HFLKTSCGSP 180
181 NYAAPEVISG KPYGPDVDIW SCGVILYALL CGTLPFDDEN IPNVFEKIKR GMYTLPNHLS 240
241 HFARDLIPRM LMVDPTMRIS ITEIRQHPWF NNHLPLYLSI PPLDT
|
| Detection Method: |  |
| Confidence: | 75.30103 |
| Match: | 2fh9A |
| Description: | No description for 2fh9A was found. |
|
Region A: Residues: [286-351] |
1 11 21 31 41 51
| | | | | |
1 IDQAKKIEEE IIQNVVNIGF DRNHVVDSLA NRIQNEATVA YHLILDNRNQ NSVPNDPFQS 60
61 KFKEIS
|
| Detection Method: | |
| Confidence: | 1.09 |
| Match: | 2cpwA |
| Description: | Solution structure of RSGI RUH-031, a UBA domain from human cDNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.36949910682766 | bayes_pls_golite062009 |
| binding | 2.36429435103114 | bayes_pls_golite062009 |
| nucleic acid binding | 2.22074627311461 | bayes_pls_golite062009 |
| protein binding | 2.06619290708535 | bayes_pls_golite062009 |
| DNA binding | 2.0124319122573 | bayes_pls_golite062009 |
| enzyme binding | 0.973545763884891 | bayes_pls_golite062009 |
| kinase binding | 0.968076648791321 | bayes_pls_golite062009 |
| hydrolase activity | 0.835394858232114 | bayes_pls_golite062009 |
| small conjugating protein binding | 0.678408535705177 | bayes_pls_golite062009 |
| protein kinase binding | 0.608887392085144 | bayes_pls_golite062009 |
| ubiquitin binding | 0.319972124839967 | bayes_pls_golite062009 |
| catalytic activity | 0.2736776367506 | bayes_pls_golite062009 |
| damaged DNA binding | 0.0421213942095382 | bayes_pls_golite062009 |
| transcription factor binding | 0.00604949932390486 | bayes_pls_golite062009 |
|
Region A: Residues: [352-494] |
1 11 21 31 41 51
| | | | | |
1 DGIFNSTLPV QNITSHVGHS FSALYGLKSN VKDDKTWTLG LQSQGSPYDI MTEIFKALQN 60
61 LKICWKKIGL YNIKCRWVRS FAYYKNHTIE DECAIILPTV IKFEIQLYKV REGKYLLDIL 120
121 RIDGPQFIFF DLCVAFLREL GVL
|
| Detection Method: | |
| Confidence: | 24.0 |
| Match: | 2qlvA |
| Description: | No description for 2qlvA was found. |
