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View Structure Prediction Details

Protein: BXL1_ARATH
Organism: Arabidopsis thaliana
Length: 774 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BXL1_ARATH.

Description E-value Query
Range
Subject
Range
gi|86553064 - gi|86553064|gb|AAS17751.2| beta xylosidase [Fragaria x ananassa]
682.0 [0..1] [774..1]

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Predicted Domain #1
Region A:
Residues: [1-628]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCYNKALLI GNKVVVILVF LLCLVHSSES LRPLFACDPA NGLTRTLRFC RANVPIHVRV  60
   61 QDLLGRLTLQ EKIRNLVNNA AAVPRLGIGG YEWWSEALHG ISDVGPGAKF GGAFPGATSF 120
  121 PQVITTAASF NQSLWEEIGR VVSDEARAMY NGGVAGLTYW SPNVNILRDP RWGRGQETPG 180
  181 EDPIVAAKYA ASYVRGLQGT AAGNRLKVAA CCKHYTAYDL DNWNGVDRFH FNAKVTQQDL 240
  241 EDTYNVPFKS CVYEGKVASV MCSYNQVNGK PTCADENLLK NTIRGQWRLN GYIVSDCDSV 300
  301 DVFFNQQHYT STPEEAAARS IKAGLDLDCG PFLAIFTEGA VKKGLLTEND INLALANTLT 360
  361 VQMRLGMFDG NLGPYANLGP RDVCTPAHKH LALEAAHQGI VLLKNSARSL PLSPRRHRTV 420
  421 AVIGPNSDVT ETMIGNYAGK ACAYTSPLQG ISRYARTLHQ AGCAGVACKG NQGFGAAEAA 480
  481 AREADATVLV MGLDQSIEAE TRDRTGLLLP GYQQDLVTRV AQASRGPVIL VLMSGGPIDV 540
  541 TFAKNDPRVA AIIWAGYPGQ AGGAAIANII FGAANPGGKL PMTWYPQDYV AKVPMTVMAM 600
  601 RASGNYPGRT YRFYKGPVVF PFGFGLSY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 116.0
Match: 1ex1A
Description: Beta-D-glucan exohydrolase, N-terminal domain; Beta-D-glucan exohydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 3.03213713925196 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 3.00088487541785 bayes_pls_golite062009
catalytic activity 1.85569074294201 bayes_pls_golite062009
hydrolase activity 1.15751720508639 bayes_pls_golite062009
chitinase activity 0.700083867878222 bayes_pls_golite062009
glucosidase activity 0.528679164808812 bayes_pls_golite062009
hexosaminidase activity 0.220458268933622 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [629-774]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTFTHSLAKS PLAQLSVSLS NLNSANTILN SSSHSIKVSH TNCNSFPKMP LHVEVSNTGE  60
   61 FDGTHTVFVF AEPPINGIKG LGVNKQLIAF EKVHVMAGAK QTVQVDVDAC KHLGVVDEYG 120
  121 KRRIPMGEHK LHIGDLKHTI LVQPQL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.36
Match: 1ogmX
Description: Dex49A from Penicillium minioluteum
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle