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View Structure Prediction Details

Protein: HMOX3_ARATH
Organism: Arabidopsis thaliana
Length: 285 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HMOX3_ARATH.

Description E-value Query
Range
Subject
Range
HMOX4_ARATH - Heme oxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=HO4 PE=1 SV=1
339.0 [0..1] [285..1]
gi|14485579 - gi|14485579|gb|AAK63014.1|AF320030_1 heme oxygenase 1 [Pinus taeda]
325.0 [0..11] [285..41]
gi|14485569 - gi|14485569|gb|AAK63009.1|AF320025_1 heme oxygenase 3 [Glycine max]
315.0 [0..35] [285..1]
gi|26189984 - gi|26189984|emb|CAD34591.1| heme oxygenase [Ceratodon purpureus]
308.0 [0..4] [285..35]
gi|14485575 - gi|14485575|gb|AAK63012.1|AF320028_1 heme oxygenase 1 [Lycopersicon esculentum]
307.0 [0..52] [285..48]

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Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTRLNPSC HFPASTRLSC ESYLGLRTTG RISYARTLTA PRGYLAVKAN GGQASVVTAA  60
   61 AITEKQQKKY P

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.833 N/A N/A d.9.1 Interleukin 8-like chemokines

Predicted Domain #2
Region A:
Residues: [72-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GESKGFVEEM RFVAMRLHTK DQAREGEKES RSPEEGPVAK WEPTVEGYLH FLVDSKLVYD  60
   61 TLEGIIDGSN FPTYAGFKNT GLERAESLRK DLEWFKEQGY EIPEPMAPGK TYSEYLKDLA 120
  121 ENDPQAFICH FYNIYFAHSA GGQMIGTKVS KKILDNKELE FYKWDGQLSQ LLQNVRQKLN 180
  181 KVAEWWTREE KSHCLEETEK SFKFSGEILR LILS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.522879
Match: 1we1A
Description: Crystal structure of heme oxygenase-1 from cyanobacterium Synechocystis sp. PCC6803 in complex with heme
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle