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View Structure Prediction Details

Protein: GUN8_ARATH
Organism: Arabidopsis thaliana
Length: 492 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GUN8_ARATH.

Description E-value Query
Range
Subject
Range
gi|2440035 - gi|2440035|emb|CAA67157.1| endo-1,4-beta-glucanase [Arabidopsis thaliana]
609.0 [0..1] [492..1]

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Predicted Domain #1
Region A:
Residues: [1-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKSLIFPV ILLAVLLFSP PIYSAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRRDS  60
   61 ALRDGSSAGV DLSGGYYDAG DNIKFGFPMA FTTTMLSWSI IDFGKTMGPE LRNAVKAVKW 120
  121 GTDYLLKATA IPGVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDRAHPG SDVAGETAAA 180
  181 LAAASIVFRK RDPAYSRLLL DRATRVFAFA NRYRGAYSNS LYHAVCPFYC DFNGYQDELL 240
  241 WGAAWLHKAS RKRAYREFIV KNEVILKAGD TINEFGWDNK HAGINVLISK EVLMGKAEYF 300
  301 ESFKQNADGF ICSILPGISH PQVQYSRGGL LVKTGGSNMQ HVTSLSFLLL AYSNYLSHAK 360
  361 KVVPCGELTA SPSLLRQIAK RQVDYILGDN PMGLSYMVGY GQKFPRRIHH RGSSVPSVSA 420
  421 HPSHIGCKEG SRYFLSPNPN PNLLVGAVVG GPNVTDAFPD SRPYFQQSEP TTYINAPLVG 480
  481 LLGYFSAHST WR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 141.0
Match: 1js4A
Description: Endo/exocellulase:cellobiose E-4, N-terminal domain; Endo/exocellulase:cellobiose E-4, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 1.97294566761911 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.84501307796637 bayes_pls_golite062009
catalytic activity 1.16285856935495 bayes_pls_golite062009
hydrolase activity 0.0225207980048139 bayes_pls_golite062009
trehalase activity 0.0127245623766304 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle