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View Structure Prediction Details

Protein: gi|17529168, gi|...
Organism: Arabidopsis thaliana
Length: 162 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17529168, gi|....

Description E-value Query
Range
Subject
Range
gi|85721638, gi|... - gi|85858547|ref|YP_460749.1| phosphatidylethanolamine-binding protein [Syntrophus aciditrophicus SB]...
196.0 [0..3] [160..31]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEELRLVS PTIDNDGKLP RKYTMAGQGV KKDISPPLEW YNVPEGTKTL ALVVEDIDAP  60
   61 DPSGPLVPWT VWVVVDIPPE MKGLPEGYSG NEDQTTGIRE GNNDHKIPGW RGPLLPSHGH 120
  121 RFQFKLFALD DKPKIGHTVT KERLLIAIEG HVLGEAILTC LA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.522879
Match: 1fjjA
Description: Hypothetical protein YbhB
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0348943211245614 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle