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View Structure Prediction Details

Protein: ADF9_ARATH
Organism: Arabidopsis thaliana
Length: 130 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ADF9_ARATH.

Description E-value Query
Range
Subject
Range
gi|48374972 - gi|48374972|gb|AAT42170.1| putative actin depolymerizing factor [Sorghum bicolor]
189.0 [0..1] [129..334]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDDCKKSFM EMKWKKVHRY VVYKLEEKSR KVTVDKVGAA GESYDDLAAS LPEDDCRYAV  60
   61 FDFDYVTVDN CRMSKIFFIT WSPEASRIRE KMMYATSKSG LRRVLDGVHY ELQATDPTEM 120
  121 GFDKIQDRAK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.39794
Match: 1f7sA
Description: Cofilin (actin depolymerizing factor, ADF)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
actin binding 7.52071741004022 bayes_pls_golite062009
cytoskeletal protein binding 6.04859625643932 bayes_pls_golite062009
actin filament binding 5.45532510538573 bayes_pls_golite062009
binding 2.84811181543046 bayes_pls_golite062009
protein binding 1.87981807141519 bayes_pls_golite062009
phosphatidylinositol-4,5-bisphosphate binding 1.3406661967545 bayes_pls_golite062009
phosphatidylserine binding 0.588992286163708 bayes_pls_golite062009
structural constituent of cytoskeleton 0.482954032096802 bayes_pls_golite062009
actin monomer binding 0.224304003054399 bayes_pls_golite062009

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