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View Structure Prediction Details

Protein: COAE_ARATH
Organism: Arabidopsis thaliana
Length: 232 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COAE_ARATH.

Description E-value Query
Range
Subject
Range
COAE_ORYSJ - Dephospho-CoA kinase OS=Oryza sativa subsp. japonica GN=Os01g0360600 PE=2 SV=1
189.0 [0..1] [227..1]

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Predicted Domain #1
Region A:
Residues: [1-232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIVGLTGGI ASGKSTVSNL FKASGIPVVD ADVVARDVLK KGSGGWKRVV AAFGEEILLP  60
   61 SGEVDRPKLG QIVFSSDSKR QLLNKLMAPY ISSGIFWEIL KQWASGAKVI VVDIPLLFEV 120
  121 KMDKWTKPIV VVWVSQETQL KRLMERDGLS EEDARNRVMA QMPLDSKRSK ADVVIDNNGS 180
  181 LDDLHQQFEK VLIEIRRPLT WIEFWRSRQG AFSVLGSVIL GLSVCKQLKI GS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.69897
Match: 1vhlA
Description: Crystal structure of dephospho-CoA kinase with adenosine-5'-diphosphate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
dephospho-CoA kinase activity 2.08198137437575 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
nucleic acid binding 0.727912309521959 bayes_pls_golite062009
DNA binding 0.263924823205515 bayes_pls_golite062009
binding 0.0673679334754882 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle