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View Structure Prediction Details

Protein: ACH10_ARATH
Organism: Arabidopsis thaliana
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACH10_ARATH.

Description E-value Query
Range
Subject
Range
gi|14596165 - gi|14596165|gb|AAK68810.1| 1-aminocyclopropane-1-carboxylate oxidase [Arabidopsis thaliana]
360.0 [0..1] [362..1]

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Predicted Domain #1
Region A:
Residues: [1-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTENSEKIDR LNDLTTFIST KTGVKGLVDA EITEVPSMFH VPSSILSNNR PSDISGLNLT  60
   61 VPIIDLGDRN TSSRNVVISK IKDAAENWGF FQVINHDVPL TVLEEIKESV RRFHEQDPVV 120
  121 KNQYLPTDNN KRFVYNNDFD LYHSSPLNWR DSFTCYIAPD PPNPEEIPLA CRSAVIEYTK 180
  181 HVMELGAVLF QLLSEALGLD SETLKRIDCL KGLFMLCHYY PPCPQPDLTL GISKHTDNSF 240
  241 LTLLLQDQIG GLQVLHEDYW VDVPPVPGAL VVNIGDFMQL ITNDKFLSVE HRVRPNKDRP 300
  301 RISVACFFSS SLSPNSTVYG PIKDLLSDEN PAKYKDITIP EYTAGFLASI FDEKSYLTNY 360
  361 MI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.69897
Match: 1gp4A
Description: Anthocyanidin synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.588242505102319 bayes_pls_golite062009
nucleic acid binding 0.0678642854814351 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle