| Protein: | Y1421_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 587 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1421_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
347.0 | [0..6] | [581..600] |
|
Region A: Residues: [1-196] |
1 11 21 31 41 51
| | | | | |
1 MQIFLFFFSL ILCFVLISSQ TLEDDKKALL HFLSSFNSSR LHWNQSSDVC HSWTGVTCNE 60
61 NGDRIVSVRL PAVGFNGLIP PFTISRLSSL KFLSLRKNHF TGDFPSDFTN LKSLTHLYLQ 120
121 HNHLSGPLLA IFSELKNLKV LDLSNNGFNG SIPTSLSGLT SLQVLNLANN SFSGEIPNLH 180
181 LPKLSQINLS NNKLIG
|
| Detection Method: |  |
| Confidence: | 15.69897 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| molecular transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| receptor activity | 2.44108148686445 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.25077658159974 | bayes_pls_golite062009 |
| binding | 1.87302803330255 | bayes_pls_golite062009 |
| protein kinase activity | 1.43632437878638 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.16530645523007 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.12585418084562 | bayes_pls_golite062009 |
| kinase activity | 1.11577341189523 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 1.04507575991279 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| transferase activity | 0.435331931559158 | bayes_pls_golite062009 |
| nucleic acid binding | 0.370391722473665 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.231213253402712 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.154501444195573 | bayes_pls_golite062009 |
|
Region A: Residues: [197-285] |
1 11 21 31 41 51
| | | | | |
1 TIPKSLQRFQ SSAFSGNNLT ERKKQRKTPF GLSQLAFLLI LSAACVLCVS GLSFIMITCF 60
61 GKTRISGKLR KRDSSSPPGN WTSRDDNTE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [286-587] |
1 11 21 31 41 51
| | | | | |
1 EGGKIIFFGG RNHLFDLDDL LSSSAEVLGK GAFGTTYKVT MEDMSTVVVK RLKEVVVGRR 60
61 EFEQQMEIIG MIRHENVAEL KAYYYSKDDK LAVYSYYNHG SLFEILHGNR GRYHRVPLDW 120
121 DARLRIATGA ARGLAKIHEG KFIHGNIKSS NIFLDSQCYG CIGDVGLTTI MRSLPQTTCL 180
181 TSGYHAPEIT DTRRSTQFSD VYSFGVVLLE LLTGKSPVSQ AELVPTGGEN MDLASWIRSV 240
241 VAKEWTGEVF DMEILSQSGG FEEEMVEMLQ IGLACVALKQ QERPHIAQVL KLIEDIRSVD 300
301 AE
|
| Detection Method: | |
| Confidence: | 62.09691 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
