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View Structure Prediction Details

Protein: ATCA1_ARATH
Organism: Arabidopsis thaliana
Length: 284 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATCA1_ARATH.

Description E-value Query
Range
Subject
Range
CAH2_TRIHK - Carbonic anhydrase 2 OS=Tribolodon hakonensis GN=ca2 PE=2 SV=3
301.0 [0..28] [266..2]

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Predicted Domain #1
Region A:
Residues: [1-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIMMMIKLC FFSMSLICIA PADAQTEGVV FGYKGKNGPN QWGHLNPHFT TCAVGKLQSP  60
   61 IDIQRRQIFY NHKLNSIHRE YYFTNATLVN HVCNVAMFFG EGAGDVIIEN KNYTLLQMHW 120
  121 HTPSEHHLHG VQYAAELHMV HQAKDGSFAV VASLFKIGTE EPFLSQMKEK LVKLKEERLK 180
  181 GNHTAQVEVG RIDTRHIERK TRKYYRYIGS LTTPPCSENV SWTILGKVRS MSKEQVELLR 240
  241 SPLDTSFKNN SRPCQPLNGR RVEMFHDHER VDKKETGNKK KKPN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.221849
Match: 1g3zA
Description: Carbonic anhydrase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
carbonate dehydratase activity 2.35405414226159 bayes_pls_golite062009
binding 1.59667704693142 bayes_pls_golite062009
protein binding 1.30419076438266 bayes_pls_golite062009
catalytic activity 0.97285738666961 bayes_pls_golite062009
zinc ion binding 0.744428270762821 bayes_pls_golite062009
transition metal ion binding 0.36067052386032 bayes_pls_golite062009
carbon-oxygen lyase activity 0.0641135521348118 bayes_pls_golite062009
hydro-lyase activity 0.0479238316186823 bayes_pls_golite062009
lyase activity 0.0337150119314038 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle