YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: IPYR4_ARATH
Organism: Arabidopsis thaliana
Length: 216 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPYR4_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593570 - gi|21593570|gb|AAM65537.1| inorganic pyrophosphatase-like protein [Arabidopsis thaliana]
306.0 [0..1] [216..1]

Back

Predicted Domain #1
Region A:
Residues: [1-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPIEVSTK SYVEKHVSLP TLNERILSSM SHRSVAAHPW HDLEIGPEAP IIFNCVVEIG  60
   61 KGSKVKYELD KTTGLIKVDR ILYSSVVYPH NYGFIPRTLC EDSDPIDVLV IMQEPVIPGC 120
  121 FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE 180
  181 NKEVAVNDFL PATAAYDAVQ HSMDLYADYV VENLRR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.522879
Match: 1udeA
Description: Crystal structure of the Inorganic pyrophosphatase from the hyperthermophilic archaeon Pyrococcus horikoshii OT3
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
inorganic diphosphatase activity 2.74116819406619 bayes_pls_golite062009
catalytic activity 1.33262120571864 bayes_pls_golite062009
binding 0.947569244871282 bayes_pls_golite062009
hydrolase activity 0.622613523623213 bayes_pls_golite062009
protein binding 0.30018672253552 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.130183342564216 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.129135337748915 bayes_pls_golite062009
pyrophosphatase activity 0.125429411374269 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle